Water and nutrient circulation in Puget Sound

In a new series we are calling Ask a Scientist we interview local researchers to get their thoughts on some of the important but lesser-known scientific facts about the Puget Sound ecosystem. Today, we speak with University of Washington oceanographer Parker MacCready about Puget Sound’s “underwater Amazon” and why it has profound implications for Puget Sound science and policy. It all begins, he says, with the mixing of fresh and salt water and something called the estuarine exchange flow.

Puget Sound is often referred to as the second largest estuary in the United States behind only Chesapeake Bay, but its overall size may be less important than its complexity. The place is defined by the mixing of saltwater from the ocean and freshwater from creeks and rivers that create an almost alchemical transformation of habitat. In this article, we look at the geologic forces that formed Puget Sound and made it the dynamic system that we understand today.   

The Salish Sea Model is a computer model used to predict spatial and temporal patterns related to water circulation in the Salish Sea. It was developed at the United States Department of Energy's Pacific Northwest National Laboratory with funding from the Environmental Protection Agency. It is housed at the University of Washington Center for Urban Waters which is affiliated with the Encyclopedia of Puget Sound.  

A 2021 article in the journal JGR Oceans describes circulation and mixing in the Salish Sea. The findings are based on simulations produced by the LiveOcean computer model.

A 2019 paper in the Journal of Geophysical Research: Oceans outlines how the Salish Sea Model describes the impacts of climate change, sea level rise and nutrient loads on the region's nearshore environment.

This article provides a general overview of tidal patterns in Puget Sound. 

The amount of oxygen in the Salish Sea is dependent on water circulation which distributes chemical elements such as nitrogen through the system.

The Puget Sound ecosystem is shaped by its physical environment. This article looks at Puget Sound's geologic history as well as dynamic factors such as the flow of its rivers and currents.

The Puget Sound Model was designed and built by the University of Washington School of Oceanography in the early 1950s to simulate the tides and currents of Puget Sound. A series of videos produced by the Encyclopedia of Puget Sound describes its construction and operation.

The Puget Sound Model was designed and built in the early 1950s at the University of Washington School of Oceanography as a research and teaching tool for understanding Puget Sound circulation patterns.

One of the first working models of Puget Sound was a scaled-down concrete reproduction, with actual water running through channels, around islands and into bays, inlets, and harbors. Motors, pumps and timing gears are part of an elaborate mechanism that replicates tides and river flows in the still-functioning model.

Estuaries around the world including Puget Sound perform an amazing feat of continuous water mixing called estuarine exchange flow. 

The year 2021 was generally drier and warmer including a heat wave in June. Higher river flows followed a rainy and cloudy fall. In 2021, EOPS aerial images continued to capture the diversity of phenomena on the water, with support from its wonderful contributors who documented visible water quality issues across the larger Puget Sound region. With our Artists Corner and story maps on critters in the mud, we hope to continue to inspire, educate, and motivate our community to keep curious and watchful eyes over the environment.

Despite a La Niña, precipitation and rain have been lower since March, leaving only snow-fed rivers running high. Due to lower rainfall and warm summer temperatures the salinity of Puget Sound is now generally higher. Strong blooms and large patches of organic material and macro-algae are building up in many places and wash onto beaches. During very hot summer days, tidal mudflats and beaches can get really warm. Beach wrack can harbor increased bacteria numbers now. See SCUBA cleaning up at Redondo beach.

After a wet winter/spring transition it has been noticeably drier, warmer and sunnier. River flows are near normal levels and in Puget Sound and coastal bays salinity is increasing above normal. The spring bloom is developing but not very pronounced, yet, Noctiluca is already visible in southern Hood Canal. Suspended sediment near rivers and creeks, failing bluffs, and shellfish activities are frequent. Capturing herring spawning from the plane is informative; pilots share their observations.

We are in a weakening La Niña, coastal downwelling has lessened and we are getting out of a cold and wet stretch, hurray. In March, rivers have almost returned to normal and carry clear water. It’s a good time to go diving if you don’t mind cold water. The productive season has only started in some places and patches of jellyfish are visible. Have a look at this edition and marvel about the secrets of the dead, or mysterious sediment clouds and the oil sheen spotted near Lummi Bay.

Rivers are flowing higher than normal since 2020. Winter weather has been warmer and wetter. In marine waters, temperatures have become too cool for Northern Pacific anchovies to tolerate in North Sound. From patches of jellyfish and snow geese, to sediment and early blooms, there is more happening in the winter than you might expect. Puget Sound has many species worth showcasing such as the heart crab – a shy critter that wears its heart on its shell.

An estuary is a place where saltwater from the ocean mixes with freshwater from rivers and streams. Technically, this defines all of Puget Sound, but scientists have identified several types of "sub-estuaries" within the water body. These include pocket estuaries (or embayments), tidally-influenced rivers and wetlands and other areas near the shoreline connected with freshwater sources. This summary provides descriptions of these estuaries from the Washington State Department of Natural Resources, the Puget Sound Nearshore Partnership and others.  

A warm and dry summer ended with a smoky September due to massive wildfires that were followed by strong rain. As a consequence, muddy river plumes in Puget Sound are very visible, especially near the Nooksack River. During summer, many wonderful citizen contributions documented the large formation of organic material in Central Sound and helped us cover the gap in EOPS flight from April-September. By September when we started flying again, a few bays still had red-brown blooms. Nevertheless, schools of fish are abundant, and jellyfish are sparse, which is good news. Meet our new ocean acidification experts.

Years after the appearance of the devastating marine heat wave known as "the blob," scientists are still working to understand how it has affected the Salish Sea. In some ways, they say, it is like the blob never left.

Scientists are using computer models to address complex issues in the Salish Sea like the rise of harmful algal blooms and the movement of toxic PCBs. LiveOcean, Atlantis and the Salish Sea Model are three systems that are changing the game for ecologists and other researchers.

A new report from the Puget Sound Ecosystem Monitoring Program says climate change altered the base of Puget Sound's food web in 2018, diminishing microscopic phytoplankton necessary for marine life. Scientists also observed lower abundances of fish, seabirds, and marine mammals.

LiveOcean is a computer model simulating ocean water properties in Puget Sound and the Pacific Northwest. It is produced by the University of Washington Ocean Modeling Group and makes three-day forecasts of currents, temperature, salinity and many biogeochemical fields including harmful algal blooms.

The diversity and complexity of estuarine ecosystems is vital to the overall health of Puget Sound. This summary fact sheet focuses on the current state of these ecosystems in Puget Sound—large river deltas, embayments, their interconnecting beaches, and rocky coasts—and the historical changes that have occurred since the development of the Puget Sound coastline. Additional emphasis is placed on the historical losses of tidal wetlands within these estuaries. 

As the region's population grows, scientists say we can expect to see increasing amounts of nitrogen and other elements flowing into Puget Sound. Known as “nutrients” these elements are naturally occurring and even necessary for life, but officials worry that nutrients from wastewater and other human sources are tipping the balance. That could mean big problems for fish and other marine life, gradually depleting the water of oxygen and altering the food web.

A regional sewage-treatment system in Thurston County has helped contain  low-oxygen problems in Budd Inlet as the population continues to grow. The system cleans up some of the effluent for replenishing groundwater supplies.

High amounts of elements such as nitrogen can cause blooms of phytoplankton that sometimes trigger perturbations throughout the food web. This occurs most often in the spring and summer after the long, dark, cloudy days of winter begin to fade.

Under the federal Clean Water Act, states are required to assess the quality of their surface waters and compile a list of polluted water bodies. The law mandates cleanup plans to address pollution and other water-quality problems. This article describes how this process works in Washington state for dissolved oxygen. 

The Puget Sound Ecosystem Monitoring Program (PSEMP) is an independent program established by state and federal statute to monitor environmental conditions in Puget Sound. 

The Puget Sound Ecosystem Monitoring Program released its fifth annual Marine Waters Overview this week. The report provides an assessment of marine conditions for the year 2015 and includes updates on water quality as well as status reports for select plankton, seabirds, fish and marine mammals.

Puget Sound is the second largest estuary in the contiguous United States. Today, we understand that estuaries — where freshwater and saltwater merge — are among the most productive places for life to exist.

Hypoxia, defined as dissolved oxygen (DO) concentrations less than 2 mg / L, has become widespread throughout estuaries and semi-enclosed seas throughout the world (Diaz 2001). 

Scientists have identified the strong underwater currents of Puget Sound's Admiralty Inlet as a potential source of electricity for nearby utilities. The following article describes some of the basic principles and mechanisms of tidal energy.  

Once a month, Washington State Department of Ecology marine scientists take to the air to obtain high-resolution aerial photo observations and gather water data at the agency's monitoring stations and via state ferry transects. This provides a visual picture of the health of Puget Sound, which they call Eyes Over Puget Sound or EOPS.

An independent review conducted by the Puget Sound Institute (PSI) is featured in findings by the Environmental Protection Agency and the Washington State Department of Ecology that there is currently “no compelling evidence” that humans are the cause for recent trends in declines in dissolved oxygen in Hood Canal.